113) Yang YG, Chen HH, Abdullah Al M, Ndayishimiye JC, Yang JR, Isabwe A, Luo AQ, Yang J*. 2022. Urbanization reduces resource use efficiency of phytoplankton community by altering the environment and decreasing biodiversity. Journal of Environmental Sciences 112: 140–151 (2022.02.01) DOI: https://doi.org/10.1016/j.jes.2021.05.001 (中科院分区SCI二区, 通讯作者)
112) Abdullah Al M, Xue YY, Xiao P, Chen HH, Zhang CS, Duan M*, Yang J*. 2021. DNA metabarcoding reveals the significant influence of anthropogenic effects on microeukaryotic communities in urban waterbodies. Environmental Pollution 285: 117336 (2021.09.15) DOI: https://doi.org/10.1016/j.envpol.2021.117336 (中科院分区SCI二区, 通讯作者)
111) Ndayishimiye JC, Lin T, Nyirabuhoro P, Zhang G, Zhang WJ, Mazei Y, Ganjidoust H, Yang J*. 2021. Decade-scale change in testate amoebae community primarily driven by anthropogenic disturbance than natural change in a large subtropical reservoir. Science of the Total Environment 784: 147026 (2021.08.25) DOI: https://doi.org/10.1016/j.scitotenv.2021.147026 (SCI二区, 通讯作者)
110) Mo YY, Peng F, Gao XF, Xiao P, Logares R, Jeppesen E, Ren KX, Xue YY, Yang J*. 2021. Low shifts in salinity determined assembly process and network stability of microeukaryotic plankton communities in urban reservoir. Microbiome 2021, 9: 128 (2021.06.03) DOI: https://doi.org/10.1186/s40168-021-01079-w (SCI一区, 通讯作者)
109) Nyirabuhoro P, Gao XF, Ndayishimiye JC, Xiao P, Mo YY, Ganjidoust H, Yang J*. 2021. Responses of abundant and rare bacterioplankton to temporal change in a subtropical urban reservoir. FEMS Microbiology Ecology 97(4): fiab036 (2021.04.01) DOI: https://doi.org/10.1093/femsec/fiab036 (SCI二区, 通讯作者)
108) Mo YY, Zhang WJ, Wilkinson DM, Yu Z, Xiao P, Yang J*. 2021. Biogeography and co-occurrence patterns of bacterial generalists and specialists in three subtropical marine bays. Limnology and Oceanography 66(3): 793–806 (2021.03.25) DOI: https://doi.org/10.1002/lno.11643 (SCI二区, 通讯作者)
107) Zhang HX, Huo SL, Xiao Z, He ZS, Yang J, Yeager KM, Li XC, Wu FC. 2021. Climate and nutrient-driven regime shift of cyanobacterial communities in low-latitude plateau lakes. Environmental Science & Technology 55(5): 3408–3418 (2021.03.02) DOI: https://doi.org/10.1021/acs.est.0c05234 (SCI一区)
106) Hou LY#, Zhang LP#, Li FR, Huang SJ, Yang J, Ma C, Zhang DX, Yu CP, Hu AY. 2021. Urban ponds as hotspots of antibiotic resistome in the urban environment. Journal of Hazardous Materials 403: 124008 (2021.02.05) DOI: https://doi.org/10.1016/j.jhazmat.2020.124008 (SCI一区)
105) Yang JR#, Yu XQ#, Chen HH, Kuo YM, Yang J*. 2021. Structural and functional variations of phytoplankton communities in the face of multiple disturbances. Journal of Environmental Sciences 100: 287–297 (2021.02.01) DOI: https://doi.org/10.1016/j.jes.2020.07.026 (SCI二区, 通讯作者)
104) Yu XQ#, Yang JR#, Chen JX, Isabwe A, Yang J*. 2021. On the use of Chemotaxonomy, a phytoplankton identification and quantification method based on pigment for quick surveys of subtropical reservoirs. Environmental Science and Pollution Research 28(3): 3544–3555 (2021.01.08) DOI: https://doi.org/10.1007/s11356-020-10704-4 (SCI三区, 通讯作者)
103) Gao XF, Chen HH, Gu BH, Jeppesen E, Xue YY, Yang J*. 2021. Particulate organic matter as causative factor to eutrophication of subtropical deep freshwater: role of typhoon (tropical cyclone) in the nutrient cycling. Water Research 188: 116470 (2021.01.01) DOI: https://doi.org/10.1016/j.watres.2020.116470 (SCI一区, 通讯作者)
102) Ndayishimiye JC#, Nyirabuhoro P#, Wang WP, Mazei Y, Yang J*. 2020. Morphology of testate amoeba Difflugia australis (Playfair, 1918) Gauthier-Lièvre et Thomas, 1958 from a subtropical reservoir (southeast China). Zootaxa 4890(1): 97–108 (2020.12.01) DOI: https://doi.org/10.11646/zootaxa.4890.1.5 (SCI四区, 通讯作者)
101) Wang WP, Ren KX, Chen HH, Gao XF, R？nn R, Yang J*. 2020. Seven-year dynamics of testate amoeba communities driven more by stochastic than deterministic processes in two subtropical reservoirs. Water Research 185: 116232 (2020.10.15) DOI: https://doi.org/10.1016/j.watres.2020.116232 (SCI一区, 通讯作者)
100) Nyirabuhoro P, Liu M, Xiao P, Liu LM, Yu Z, Wang LN, Yang J*. 2020. Seasonal variability of conditionally rare taxa in the water column bacterioplankton community of subtropical reservoirs in China. Microbial Ecology 80(1): 14–26 (2020.07.08) DOI: https://doi.org/10.1007/s00248-019-01458-9 (SCI三区, 通讯作者)
99) Ndayishimiye JC, Nyirabuhoro P, Wang Q, Yang XD, Yang J*. 2020. Effects of natural and anthropogenic changes on testate amoebae communities in an alpine lake over the past 2500 years. Science of the Total Environment 721:137684 (2020.06.15) DOI: https://doi.org/10.1016/j.scitotenv.2020.137684 (SCI二区, 通讯作者)
98) Pan YB, Yang J, McManus GB, Lin SJ, Zhang WJ*. 2020. Insights into protist diversity and biogeography in intertidal sediments sampled across a range of spatial scales. Limnology and Oceanography 65(5): 1103–1115 (2020.05.13) DOI: https://doi.org/10.1002/lno.11375 (SCI二区)
97) Peng F, Guo YY, Isabwe A, Chen HH, Wang YM, Zhang YP, Zhu ZX, Yang J*. 2020. Urbanization drives riverine bacterial antibiotic resistome more than taxonomic community at watershed scale. Environment International 137, 105524 (2020.04.01) DOI: https://doi.org/10.1016/j.envint.2020.105524 (SCI一区, 通讯作者)
96) Wang YM, Pan J, Yang J, Zhou ZC, Pan YP, Li M*. 2020. Patterns and processes of free-living and particle-associated bacterioplankton and archaeaplankton communities in a subtropical river-bay system in South China. Limnology and Oceanography 65: S161–S179 (2020.01.22) DOI: https://doi.org/10.1002/lno.11314 (SCI二区)
95) Gao XF, Chen HH, Govaert L, Wang WP, Yang J*. 2019. Responses of zooplankton body size and community trophic structure to temperature change in a subtropical reservoir. Ecology and Evolution 9(22): 12544–12555 (2019.11.25) DOI: https://doi.org/10.1002/ece3.5718 (SCI三区, 通讯作者)
94) Liu X#, Xiao P#, Guo YY, Liu LM, Yang J*. 2019. The impacts of different high-throughput profiling approaches on the understanding of bacterial antibiotic resistance genes in a freshwater reservoir. Science of the Total Environment 693: 133585 (2019.11.25) DOI: https://doi.org/10.1016/j.scitotenv.2019.133585 (SCI二区, 通讯作者)
93) Chen WD, Ren KX, Isabwe A, Chen HH, Liu M, Yang J*. 2019. Stochastic processes shape microeukaryotic community assembly in a subtropical river across wet and dry seasons. Microbiome 7:138 (2019.10.22) DOI: https://doi.org/10.1186/s40168-019-0749-8 (SCI一区, 通讯作者)
92) Bobrov AA, Shimano S, Qin Y, Yang J. 2019 Testate amoebae of the Gondwana-tropical group and the southwestern border of the Palearctic. Biology Bulletin 46: 450–456 (2019.09.23) DOI: https://doi.org/10.1134/S1062359019050054 (SCI四区)
91) Lu T, Zhang Q, Lavoie M, Zhu YC, Ye YZ, Yang J, Paerl HW, Qian HF*, Zhu YG*. 2019. The fungicide azoxystrobin promotes freshwater cyanobacterial dominance through altering competition. Microbiome 7: 128 (2019.09.04) DOI: https://doi.org/10.1186/s40168-019-0744-0 (SCI一区)
90) Liu LM, Chen HH, Liu M, Yang JR, Xiao P, Wilkinson DM, Yang J*. 2019. Response of the eukaryotic plankton community to the cyanobacterial biomass cycle over six years in two subtropical reservoirs. The ISME Journal 13: 2196–2208 (2019.09.01) DOI: https://doi.org/10.1038/s41396-019-0417-9 (SCI一区, 通讯作者)
89) Peng F#, Isabwe A#, Guo YY, Chen HH, Yang J*. 2019. An extensively shared antibiotic resistome among four seasons suggests management prioritization in a subtropical riverine ecosystem. Science of The Total Environment 673: 533–540 (2019.07.10) DOI: https://doi.org/10.1016/j.scitotenv.2019.04.031 (SCI二区, 通讯作者)
88) Fang P, Peng F, Gao XF, Xiao P, Yang J*. 2019. Decoupling the dynamics of bacterial taxonomy and antibiotic resistance function in a subtropical urban reservoir as revealed by high-frequency sampling. Frontiers in Microbiology 10:1448 (2019.07.02) DOI: https://doi.org/10.3389/fmicb.2019.01448 (SCI二区, 通讯作者)
87) Isabwe A, Ren KX, Wang YM, Peng F, Chen HH, Yang J*. 2019. Community assembly mechanisms underlying the core and random bacterioplankton and microeukaryotes in a river-reservoir system. Water 11(6): 1127 (2019.06.26) DOI: https://doi.org/10.3390/w11061127 (SCI三区, 通讯作者)
86) Ndayishimiye JC#, Ju LH#, Li HK, Yang XD, Liu ZW, Yang J*. 2019. Temperature transfer functions based on freshwater testate amoebae from China. European Journal of Protistology 69: 152–164 (2019.06.01) DOI: https://doi.org/10.1016/j.ejop.2019.03.003 (SCI三区, 通讯作者)
85) Liu M, Liu LM, Chen HH, Yu Z, Yang JR, Xue YY, Huang BQ, Yang J*. 2019. Community dynamics of free-living and particle-attached bacteria following a reservoir Microcystis bloom. Science of the Total Environment 660: 501–511 (2019.04.10) DOI: https://doi.org/10.1016/j.scitotenv.2018.12.414 (SCI二区, 通讯作者)
84) 朱珍香, 高肖飞, 彭凤, 陈辉煌, 唐立娜, 杨军*. 2019. 厦门后溪水质与流域景观特征沿城乡梯度的变化分析. 生态学报39(6): 2021–2033 (2019.03.30) DOI: https://doi.org/10.5846/stxb201803280625（通讯作者）
83) Liu M, Xue YY, Yang J*. 2019. Rare plankton subcommunities are far more affected by DNA extraction kits than abundant plankton. Frontiers in Microbiology 10: 454 (2019.03.11) DOI: https://doi.org/10.3389/fmicb.2019.00454 (SCI二区, 通讯作者)
82) Ren KX, Xue YY, R？nn R, Liu LM, Chen HH, Rensing C*, Yang J*. 2018. Dynamics and determinants of amoeba community, occurrence and abundance in subtropical reservoirs and rivers. Water Research 146: 177–186 (2018.12.01) DOI: https://doi.org/10.1016/j.watres.2018.09.011 (SCI一区, 通讯作者)
81) Hu AY*, Li S, Zhang LP, Wang HJ, Yang J, Luo ZX, Rashid A, Chen SQ, Huang WX, Yu CP. 2018. Prokaryotic footprints in urban water ecosystems: a case study of urban landscape ponds in a coastal city, China. Environmental Pollution 242: 1729–1739 (2018.11.01) DOI: https://doi.org/10.1016/j.envpol.2018.07.097 (SCI二区)
80) Kuo YM, Yang J, Liu WW, Zhao EM, Li R, Yao LQ. 2018. Using generalized additive models to investigate factors influencing cyanobacterial abundance through phycocyanin fluorescence in East Lake, China. Environmental Monitoring and Assessment 190: 599 (2018.10.01) DOI: https://doi.org/10.1007/s10661-018-6981-z (SCI四区)
79) Yan WF, Guo YY, Xiao Y*, Wang SH, Ding R, Jiang JQ, Gang HY, Wang H, Yang J, Zhao F*. 2018. The changes of bacterial communities and antibiotic resistance genes in microbial fuel cells during long-term oxytetracycline processing. Water Research 142: 105–114 (2018.10.01) DOI: https://doi.org/10.1016/j.watres.2018.05.047 (SCI一区)
78) Xue YY, HH Chen, Yang JR, Liu M, Huang BQ, Yang J*. 2018. Distinct patterns and processes of abundant and rare eukaryotic plankton communities following a reservoir cyanobacterial bloom. The ISME Journal 12: 2263–2277 (2018.09.01) DOI: https://doi.org/10.1038/s41396-018-0159-0 (SCI一区, 通讯作者)
77) Mo YY, Zhang WJ*, Yang J*, Lin YS, Yu Z, Lin SJ. 2018. Biogeographic patterns of abundant and rare bacterioplankton in three subtropical bays resulting from selective and neutral processes. The ISME Journal 12: 2198–2210 (2018.09.01) DOI: https://doi.org/10.1038/s41396-018-0153-6 (SCI一区, 通讯作者)
76) Liu LM#, Su JQ#, Guo YY#, Wilkinson DM, Liu ZW, Zhu YG, Yang J*. 2018. Large-scale biogeographical patterns of bacterial antibiotic resistome in waterbodies of China. Environment International 117: 292–299 (2018.08.01) DOI: https://doi.org/10.1016/j.envint.2018.05.023 (SCI一区, 通讯作者)
75) Guo YY, Liu M, Liu LM, Liu X, Chen HH, Yang J*. 2018. The antibiotic resistome of free-living and particle-attached bacteria under a reservoir cyanobacterial bloom. Environment International 117: 107–115 (2018.08.01) DOI: https://doi.org/10.1016/j.envint.2018.04.045 (SCI一区, 通讯作者)
74) Zhang WJ*, Mo YY, Yang J, Zhou J, Lin YS, Isabwe A, Zhang J, Gao X, Yu Z. Genetic diversity pattern of microeukaryotic communities and its relationship with the environment based on PCR-DGGE and T-RFLP techniques in Dongshan Bay, southeast China. Continental Shelf Research 164: 1–9 (2018.07.15) DOI: https://doi.org/10.1016/j.csr.2018.05.006 (SCI三区)
73) Isabwe A, Yang JR, Wang YM, Liu LM, Chen HH, Yang J*. 2018. Community assembly processes underlying phytoplankton and bacterioplankton across a hydrologic change gradient in a human-impacted river. Science of the Total Environment 630: 658–667 (2018.07.15) DOI: https://doi.org/10.1016/j.scitotenv.2018.02.210 (SCI二区, 通讯作者)
72 ) 朱珍香, 杨军*. 2018. 福建水库空间分布特征：沿海密度高水量少、内陆密度低水量多. 湖泊科学30(2): 567–580 (2018.03.06) DOI: https://doi.org/10.18307/2017.020 (通讯作者)
71) Zhang WJ*, Pan YB, Yang J, Chen HH, Holohan B, Vaudrey J, Lin SJ, McManus GB*. 2018. The diversity and biogeography of abundant and rare intertidal marine microeukaryotes explained by environment and dispersal limitation. Environmental Microbiology 20(2): 462–476 (2018.02.14) DOI: https://doi.org/10.1111/1462-2920.13916 (SCI二区)
70) Liu M, Yu Z, Yu XQ, Xue YY, Huang BQ, Yang J*. 2017. Invasion by cordgrass increases microbial diversity and alters community composition in a mangrove nature reserve. Frontiers in Microbiology 8: 2503 (2017.12.15) DOI: https://doi.org/10.3389/fmicb.2017.02503 (SCI二区, 通讯作者)
69) Chen WD, Pan YB, Yu LY, Yang J*, Zhang WJ*. 2017. Patterns and processes in marine microeukaryotic community biogeography from Xiamen coastal waters and intertidal sediments, Southeast China. Frontiers in Microbiology 8: 1912 (2017.10.12) DOI: https://doi.org/10.3389/fmicb.2017.01912 (SCI二区, 通讯作者)
68) Xue YY, Yu Z, Chen HH, Yang RJ, Liu M, Liu LM, Huang BQ, Yang J*. 2017. Cyanobacterial bloom significantly boosts hypolimnelic anammox bacterial abundance in a subtropical stratified reservoir. FEMS Microbiology Ecology 93(10): fix118 (2017.10.01) DOI: https://doi.org/10.1093/femsec/fix118 (SCI二区, 通讯作者)
67) Liu LM, Liu M, Wilkinson DM, Chen HH, Yu XQ, Yang J*. 2017. DNA metabarcoding reveals that 200 μm size-fractionated filtering is unable to discriminate between planktonic microbial and large eukaryotes. Molecular Ecology Resources 17(5): 991–1002 (2017.09.01) DOI: https://doi.org/10.1111/1755-0998.12652 (SCI一区, 通讯作者)
66) Yang JR, Lv H, Isabwe A, Liu LM, Yu XQ, Chen HH, Yang J*. 2017. Disturbance-induced phytoplankton regime shifts and recovery of cyanobacteria dominance in two subtropical reservoirs. Water Research 120: 52–63 (2017.09.01) DOI: https://doi.org/10.1016/j.watres.2017.04.062 (SCI一区, 通讯作者)
65) 王丽娜, 陈辉煌, 刘乐冕, 余正, 杨军*. 2016. 亚热带分层水库固氮微生物时空分布格局. 生态学报, 36(18): 5827–5837 (2016.09.15) DOI: https://doi.org/10.5846/stxb201504250854 (通讯作者)
64) Yang J, Lv H, Yang J*, Liu LM, Yu XQ, Chen HH. 2016. Decline in water level boosts cyanobacteria dominance in subtropical reservoirs. Science of the Total Environment 557/558: 445–452 (2016.07.01) DOI: https://doi.org/10.1016/j.scitotenv.2016.03.094 (SCI二区, 通讯作者)
63) Wang HT, Liao GS, D’Souza M, Yu XQ, Yang J, Yang XR, Zheng TL. 2016. Temporal and spatial variations of greenhouse gas fluxes from a tidal mangrove wetland in Southeast China. Environmental Science and Pollution Research 23: 1873–1885 (2016.01.15) DOI: https://doi.org/10.1007/s11356-015-5440-4 (SCI三区)
62) Wang LN, Yu Z, Yang J*, Zhou J. 2015. Diazotrophic bacterial community variability in a subtropical deep reservoir is correlated with seasonal changes in nitrogen. Environmental Science and Pollution Research 22: 19695–19705 (2015.12.15) DOI: https://doi.org/10.1007/s11356-015-5144-9 (SCI三区, 通讯作者)
61) Wang YM, Liu LM, Chen HH, Yang J*. 2015. Spatiotemporal dynamics and determinants of planktonic bacterial and microeukaryotic communities in a Chinese subtropical river. Applied Microbiology and Biotechnology 99: 9255–9266 (2015.11.01) DOI: https://doi.org/10.1007/s00253-015-6773-0 (SCI二区, 通讯作者)
60) 王丽娜, 余正, 田野, 张文静, 杨军*. 2015. 基于克隆文库技术分析瘤棘砂壳虫的食物组成. 生态学报, 35(18): 6183–6188 (2015.09.15) DOI: https://doi.org/10.5846/stxb201401260195 (通讯作者)
59) Liu LM#, Yang J#, Lv H#, Yu XQ, Wilkinson DM, Yang J*. 2015. Phytoplankton communities exhibit a stronger response to environmental changes than bacterioplankton in three subtropical reservoirs. Environmental Science & Technology 49(18): 10850–10858 (2015.09.15) DOI: https://doi.org/10.1021/acs.est.5b02637 (SCI一区, 通讯作者)
58) Liu Y, Yang J*. 2015. Complete mitochondrial genome of Esox reichertii (Amur pike). Mitochondrial DNA 26(6): 927–928 (2015.09.01) DOI: https://doi.org/10.3109/19401736.2013.863294 (SCI四区, 通讯作者)
57) Liu LM, Yang J*, Yu Z, Wilkinson DM. 2015. The biogeography of abundant and rare bacterioplankton in the lakes and reservoirs of China. The ISME Journal 9: 2068–2077 (2015.09.01) DOI: https://doi.org/10.1038/ismej.2015.29 (SCI一区, 通讯作者)
56) Yu Z, Yang J*, Liu LM, Zhang WJ, Amalfitano S. 2015. Bacterioplankton community shifts associated with epipelagic and mesopelagic waters in the Southern Ocean. Scientific Reports 5: 12897 (2015.08.10) DOI: https://doi.org/10.1038/srep12897 (SCI三区, 通讯作者)
55) Wang YM, Yang J*, Liu LM, Yu Z. 2015. Quantifying the effects of geographical and environmental factors on distribution of stream bacterioplankton within nature reserves of Fujian, China. Environmental Science and Pollution Research 22: 11010–11021 (2015.07.01) DOI: https://doi.org/10.1007/s11356-015-4308-y (SCI三区, 通讯作者)
54) Yu LY, Zhang WJ*, Liu LM, Yang J. 2015. Determining microeukaryotic plankton community around Xiamen Island, southeast China, using Illumina MiSeq and PCR-DGGE techniques. PLoS ONE 10(5): e0127721 (2015.05.28) DOI: https://doi.org/10.1371/journal.pone.0127721 (SCI三区)
53) Yu XQ, Yang J*, Liu LM, Tian Y, Yu Z. 2015. Effects of Spartina alterniflora invasion on biogenic elements in a subtropical coastal mangrove wetland. Environmental Science and Pollution Research 22:3107–3115 (2015.02.01) DOI: https://doi.org/10.1007/s11356-014-3568-2 (SCI三区, 通讯作者)
52) Gomaa F#,*, Yang J#,*, Mitchell EAD, Zhang WJ, Yu Z, Todorov M, Lara E. 2015. Morphological and molecular diversification of Asian endemic Difflugia tuberspinifera (Amoebozoa, Arcellinida): a case of fast morphological evolution in protists? Protist 166(1): 122–130 (2015.02.01) DOI: https://doi.org/10.1016/j.protis.2014.11.004 (SCI三区, 通讯作者)
51) Yu Z, Zhou J, Yang J*, Yu XQ, Liu LM. 2014. Vertical distribution of diazotrophic bacterial community associated with temperature and oxygen gradients in a subtropical reservoir. Hydrobiologia 741: 69–77 (2014.12.01) DOI: https://doi.org/10.1007/s10750-014-1832-6 (SCI三区, 通讯作者)
50) 周菁, 余正, 刘开国, 田野, 余小青, 刘乐冕, 张文静, 杨军*. 2014. 典型亚热带热分层水库秋季细菌群落垂直分布. 生态学报, 34(21): 6205–6213 (2014.11.01) DOI: https://doi.org/10.5846/stxb201302030226 (通讯作者)
49) Liu Y, Yang J*. 2014. The complete mitochondrial genome sequence of Xingkai topmouth culter (Culter alburnus). Mitochondrial DNA 25(6): 451–453 (2014.11.01) DOI: https://doi.org/10.3109/19401736.2013.809430 (SCI四区, 通讯作者)
48) Ju LH, Yang J*, Liu LM, Wilkinson DM. 2014. Diversity and distribution of freshwater testate amoebae (Protozoa) along latitudinal and trophic gradients in China. Microbial Ecology 68: 657–670 (2014.11.01) DOI: https://doi.org/10.1007/s00248-014-0442-1 (SCI二区, 通讯作者)
47) Liu LM, Yang J*, Lv H, Yu Z. 2014. Synchronous dynamics and correlations between bacteria and phytoplankton in a subtropical drinking water reservoir. FEMS Microbiology Ecology 90(1): 126–138 (2014.10.01) DOI: https://doi.org/10.1111/1574-6941.12378 (SCI二区, 通讯作者)
46) Wang YB, Zhang WJ*, Lin YS, Zheng LM, Cao WQ, Yang J. 2014. Spatial and seasonal variations of large Tintinnid ciliates in Shenhu Bay of China. Oceanological and Hydrobiological Studies
43(3): 292–302 (2014.09.01) DOI: https://doi.org/10.2478/s13545-014-0144-9 (SCI四区)
45) Yu Z, Yang J*, Amalfitano S, Yu XQ, Liu LM. 2014. Effects of water stratification and mixing on microbial community structure in a subtropical deep reservoir. Scientific Reports 4: 5821 (2014.07.25) DOI: https://doi.org/10.1038/srep05821 (SCI三区, 通讯作者)
44) Wang YB, Zhang WJ*, Lin YS, Cao WQ, Zheng LM, Yang J. 2014. Phosphorus, nitrogen and chlorophyll-a are significant factors controlling ciliate communities in summer in the northern Beibu Gulf, South China Sea. PLoS ONE 9(7): e101121 (2014.07.02) DOI: https://doi.org/10.1371/journal.pone.0101121 (SCI三区)
43) Lv H, Yang J*, Liu LM, Yu XQ, Yu Z, Chiang PC. 2014. Temperature and nutrients are significant drivers of seasonal shift in phytoplankton community from a drinking water reservoir, subtropical China. Environmental Science and Pollution Research 21: 5917–5928 (2014.05.01) DOI: https://doi.org/10.1007/s11356-014-2534-3 (SCI三区, 通讯作者)
42) Yu Z, Zhang WJ, Liu LM, Yang J*. 2014. Evidence for two different morphotypes of Difflugia tuberspinifera from China. European Journal of Protistology 50: 205–211 (2014.04.01) DOI: https://doi.org/10.1016/j.ejop.2013.12.003 (SCI三区, 通讯作者)
41) Yu Z, Yang J*, Yu XQ, Liu LM, Tian Y. 2014. Aboveground vegetation influences belowground microeukaryotic community in a mangrove nature reserve. Wetlands 34: 393–401 (2014.04.01) DOI: https://doi.org/10.1007/s13157-013-0506-x (SCI四区, 通讯作者)
40) Yu Z, Yang J*, Liu LM. 2014. Denitrifier community in the oxygen minimum zone of a subtropical deep reservoir. PLoS ONE 9(3): e92055 (2014.03.24) DOI: https://doi.org/10.1371/journal.pone.0092055 (SCI三区, 通讯作者)
39) Tu YT, Chiang PC, Yang J, Chen SH, Kao CM. 2014. Application of a constructed wetland system for polluted stream remediation. Journal of Hydrology 510: 70–78 (2014.03.14) DOI: https://doi.org/10.1016/j.jhydrol.2013.12.015 (SCI二区)
38) Yu Z, Yang J*, Zhou J, Yu XQ, Liu L M, Lv H. 2014. Water stratification affects the microeukaryotic community in a subtropical deep reservoir. Journal of Eukaryotic Microbiology 61(2): 126–133 (2014.03.13) DOI: https://doi.org/10.1111/jeu.12090 (SCI三区, 通讯作者)
37) Wang YB, Zhang WJ, Lin YS, Zheng LM, Cao WQ, Yang J. 2013. Spatial pattern of the planktonic ciliate community and its relationship with the environment in spring in the northern Beibu Gulf, South China Sea. Oceanological and Hydrobiological Studies 42(4): 470–479 (2013.12.01) DOI: https://doi.org/10.2478/s13545-013-0103-x (SCI四区)
36) Lv H, Yang J*, Liu LM. 2013. Temporal pattern prevails over spatial variability in phytoplankton communities from a subtropical water supply reservoir. Oceanological and Hydrobiological Studies 42(4): 420–430 (2013.12.01) DOI: https://doi.org/10.2478/s13545-013-0098-3 (SCI四区, 通讯作者)
35) Liu LM, Yang J*, Yu XQ, Chen GJ, Yu Z. 2013. Patterns in the composition of microbial communities from a subtropical river: effects of environmental, spatial and temporal factors. PLoS ONE 8(11): e81232 (2013.11.14) DOI: https://doi.org/10.1371/journal.pone.0081232 (SCI三区, 通讯作者)
34) Wang CF, Yu XQ, Lv H, Yang J*. 2013. Nitrogen and phosphorus removal from municipal wastewater by the green alga Chlorella sp. Journal of Environmental Biology 34(2): 421–425 (2013.04.01) (SCI四区, 通讯作者)
33) Liu LM, Zhang DH, Lv H, Yu XQ, Yang J*. 2013. Plankton communities along a subtropical urban river (Houxi River, southeast China) as revealed by morphological and molecular methods. Journal of Freshwater Ecology 28(1):99–112 (2013.03.01) DOI: https://doi.org/10.1080/02705060.2012.708672 (SCI四区, 通讯作者)
32) 余小青, 杨军*, 刘乐冕, 田原, 余正, 王昌付. 2012. 九龙江口滨海湿地生源要素空间分布特征. 环境科学,
33(11):3739–3747 (2012.11.15) DOI: https://doi.org/10.13227/j.hjkx.2012.11.021 (通讯作者)
31) 刘乐冕, 杨军*, 余小青, 余正, 张永雨, 田野, 张冬红. 2012. 厦门后溪流域沿城乡梯度浮游细菌多样性及其与环境因子的关系. 应用与环境生物学报, 18(4): 591–598 (2012.08.25) DOI: https://doi.org/10.3724/SP.J.1145.2012.00591 (通讯作者)
30) Zhang YY, Yang J*, Yin XX, Yang SP, Zhu YG*. 2012. Arsenate toxicity and stress responses in the freshwater ciliate Tetrahymena pyriformis. European Journal of Protistology 48(3): 227–236 (2012.08.01) DOI: https://doi.org/10.1016/j.ejop.2012.01.005 (SCI三区, 通讯作者)
29) Yang J*, Yu XQ, Liu LM, Zhang WJ, Guo PY. 2012. Algae community and trophic state of subtropical reservoirs in southeast Fujian, China. Environmental Science and Pollution Research 19: 1432–1442 (2012.06.01) DOI: https://doi.org/10.1007/s11356-011-0683-1 (SCI三区, 通讯作者)
28) Zhang YY, Zhang F, Yang J, Jiao NZ*. 2012. Host responses of a marine bacterium, Roseobacter denitrificans OCh114, to phage infection. Archives of Microbiology 194: 323–330 (2012.05.01) DOI: https://doi.org/10.1007/s00203-011-0765-y (SCI四区)
27) Zhang WJ*, Lin YS, Cao WQ, Yang J. 2012 Genetic diversity and variance of Stentor coeruleus (Ciliophora: Heterotrichea) inferred from inter-simple sequence repeat (ISSR) fingerprinting. Journal of Eukaryotic Microbiology 59(2): 157–162 (2012.03.01) DOI: https://doi.org/10.1111/j.1550-7408.2011.00603.x (SCI三区) 26) Yang J, Zhang YY, Liu LM, Wang CF, Yu XQ. 2012. Microbial community and urban water quality. Bulletin of the Chinese Academy of Sciences 26: 76–83 (2012.03.01) DOI: https://doi.org/10.3969/j.issn.1003-3572.2012.01.011
25) Liu LM, Yang J*, Zhang YY. 2011. Genetic diversity patterns of microbial communities of in a subtropical riverine ecosystem (Jiulong River, southeast China). Hydrobiologia 678:113–125 (2011.12.01) DOI: https://doi.org/10.1007/s10750-011-0834-x (SCI三区, 通讯作者)
24) Zhang YY, Chen ZH, Zhen Z, Yang J. 2011. Metaproteomic evaluation on the microbial community functions in a mesoscale cyclonic eddy perturbation. African Journal of Microbiology Research 5: 3890–3894 (2011.10.23) DOI: https://doi.org/10.5897/AJMR11.577 (SCI四区)
23b) Zhang YY, Huang CX, Yang J*, Jiao NZ*. 2011. Interactions between marine microorganisms and their phages. Chinese Science Bulletin 56: 1770–1777 (2011.06.01) DOI: https://doi.org/10.1007/s11434-011-4503-2 (SCI三区, 通讯作者)
23a) 张永雨, 黄春晓, 杨军*, 焦念志*. 2011. 海洋微生物与噬菌体间的相互关系. 科学通报, 56: 1071–1079 (2011.05.01) (通讯作者)
22) Yin XX, Zhang YY, Yang J, Zhu YG*. 2011. Rapid biotransformation of arsenic by a model protozoan Tetrahymena thermophila. Environmental Pollution 159:837–840 (2011.04.01) DOI: https://doi.org/10.1016/j.envpol.2010.12.033 (SCI二区)
21) 刘乐冕, 杨军*, 张文静, 余正. 2010. 原生动物瘤棘砂壳虫六个自然种群的形态计量学分析. 动物学研究, 31(4): 435–443 (2010.08.22) DOI: https://doi.org/10.3724/SP.J.1141.2010.04435 (通讯作者)
20) 杨军*, Smith HG, Wilkinson DM. 2010. 北极、南极和西藏有壳虫区系与分布. 生物多样性, 18(4): 373–382 (2010.07.20) (通讯作者)
19) Yang J, Smith HG, Sherratt TN, Wilkinson DM*. 2010. Is there a size limit for cosmopolitan distribution in free-living microorganisms? A biogeographical analysis of testate amoebae from polar areas. Microbial Ecology 59:635–645 (2010.05.01) DOI: https://doi.org/10.1007/s00248-009-9615-8 (SCI二区, Cover story)
18) 张文静, 杨军, 田野. 2010. 有壳肉足虫的结构、运动以及生殖. 生物学通报, 45(1): 12–14 (2010.01.20)
17) Yang J*, Zhang WJ*, Shen YF. 2009. Relationships between testate amoebae assemblages (Protozoa) and geographic factors in Yunnan Plateau lakes, China. Journal of Freshwater Ecology 24(3): 437–443 (2009.09.03) DOI: https://doi.org/10.1080/02705060.2009.9664316 (SCI四区, 通讯作者)
16) 张文静, 杨军*, 沈韫芬. 2009. 中国有壳肉足虫(原生动物)五新纪录描述. 动物分类学报, 34(3): 686–690 (2009.07.01) (通讯作者)
15) Yang J*, Zhang WJ, Shen YF, Feng WS, Wang XH. 2007. Monitoring of organochlorine pesticides using PFU systems in Yunnan lakes and rivers, China. Chemosphere 66: 219–225 (2007.01.15) DOI: https://doi.org/10.1016/j.chemosphere.2006.05.055 (SCI二区, 通讯作者)
14) Zhang WJ, Yang J, Yu YH, Shu SW, Shen YF. 2006. Population genetic structure of Carchesium polypinum (Ciliophora: Peritrichia) in four Chinese lakes inferred from ISSR fingerprinting: high diversity but low differentiation. Journal of Eukaryotic Microbiology 53(5): 358–363 (2006.10.01) DOI: https://doi.org/10.1111/j.1550-7408.2006.00113.x (SCI三区)
13) Yang J, Zhang WJ, Feng WS, Shen YF. 2006. Geographical distribution of testate amoebae in Tibet and northwestern Yunnan and their relationships with climate. Hydrobiologia 559: 297–304 (2006.04.01) DOI: https://doi.org/10.1007/s10750-005-9400-8 (SCI三区)
12) Yang J, Zhang WJ, Feng WS, Shen YF. 2005. Freshwater testate amoebae of nine Yunnan Plateau lakes, China. Journal of Freshwater Ecology 20(4): 743–750 (2005.12.01) DOI: https://doi.org/10.1080/02705060.2005.9664798 (SCI四区)
11) Yang J, Meisterfeld R, Zhang WJ, Shen YF. 2005. Difflugia mulanensis nov. spec. (Protozoa, Rhizopoda), a freshwater testate amoeba from Lake Mulan, China. European Journal of Protistology 41(4): 269–276 (2005.11.15) DOI: https://doi.org/10.1016/j.ejop.2005.05.006 (SCI三区, Cover story)
10) Yang J, Zhang WJ, Feng WS, Shen YF. 2005. Testate amoebae (Protozoa: Rhizopoda) from northwest Yunnan, China. Journal of Freshwater Ecology 20(3): 583–590 (2005.09.01) DOI: https://doi.org/10.1080/02705060.2005.9664774 (SCI四区)
9) Zhang WJ, Yang J, Yu YH, Shen YF. 2005. Identification, cloning and characterization of microsatellite DNA in Euglena gracilis. Journal of Eukaryotic Microbiology 52(4): 356–359 (2005.07.01) DOI: https://doi.org/10.1111/j.1550-7408.2005.00044.x (SCI三区)
8) Yang J, Shen YF. 2005. Morphology, biometry and distribution of Difflugia biwae Kawamura, 1918 (Protozoa: Rhizopoda). Acta Protozoologica 44(2): 103–111 (2005.05.01) (SCI四区)
7) 杨军, 沈韫芬. 2005. 根足类原生动物半圆表壳虫壳体生物矿化特征. 动物学杂志, 40(1): 1–7 (2005.02.20) DOI: https://doi.org/10.13859/j.cjz.2005.01.001
6) 杨军, 沈韫芬，冯伟松. 2005. 中国砂壳虫属两新纪录种形态研究(表壳目, 砂壳科). 动物分类学报, 30(1): 52–56 (英文) (2005.01.01)
5) 杨军, Beyens L, 沈韫芬, 冯伟松. 2004. 瘤棘砂壳虫(肉足亚门: 根足总纲)壳体元素组成. 动物学研究, 25(5): 452–455 (英文) (2004.10.22)
4) Yang J, Beyens L, Shen YF, Feng WS. 2004. Redescription of Difflugia tuberspinifera Hu, Shen, Gu et Gong, 1997 (Protozoa: Rhizopoda: Arcellinida: Difflugiidae) from China. Acta Protozoologica 43(3): 281–289 (2004.08.01) (SCI四区)
3) 杨军, 冯伟松, 缪炜. 2004. 中国淡水与土壤有壳肉足虫最新分类名录及其区系分析. 水生生物学报, 28(4): 426–433 (2004.07.20)
2) 杨军, 冯伟松, 沈韫芬. 2004. 中国砂壳虫属新纪录(肉鞭门, 根足总纲, 叶足纲, 表壳目, 砂壳科). 动物分类学报, 29(2): 239–247 (2004.04.01)
1) 冯伟松, 杨军, 叶志鸿, 缪炜, 余育和, 黄铭洪, 沈韫芬. 2004. 凡口铅锌矿湿地处理系统的土壤原生动物. 动物学杂志, 39(1): 2–11 (2004.02.20) DOI: https://doi.org/10.13859/j.cjz.2004.01.001
发明专利:
杨军, 王文平, 任可欣. 一种砂壳虫的分离与培养技术. 2020-12-08, 中国, ZL 2018 1 0255574.1